Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825270.1_cds_XP_016502262.1_15923
CDS Infomation

[gene=LOC107820487] [db_xref=GeneID:107820487] [protein=ubiquitin carboxyl-terminal hydrolase 23-like] [protein_id=XP_016502262.1] [location=join(57669..57995,59971..60085,61296..61406,61905..62077,62277..62603,63114..63239,63645..64298,64760..65495,65623..65716,65891..66053)] [gbkey=CDS]
Sequence

ATGGGTGAGGCTACAGCTACAATGAATCAGATGGAGGAAAATTTGGGTACACAGATATCT
GGGCTTGTCGGGTCGGAGCCGGGTACGGATACGTCGTCGCTGTTTCACCGGAGGATTGAG
TTTCATTTGGCGAGAAAGCCTTTTAGTGGGTTTATAAATAATGGTGGGTTTCAGCTGGAA
ACGCTGAACCCGAACTCAGAGAAAACGGGTAAAGATAACGGGTTGGTTGTTGGGGGCGGG
AAAAAGGTCGGTGATGCTCAGATGGAAAGTAATGGGTTGGATCCAGAAGTGAGCTTCGGT
ATTGCCTTCAGAAAGATTATGAGAATTGGAGCGGGCTTGCAAAATCTGGGGAACACCTGC
TTCCTCAATTCTGTATTACAGTGCCTGACATACACTGAGCCTTTGGCAGCATACTTGGAA
AGTGGGAAGCATCAAAATTCCTGTCGTATGGCTGGGTTTTGTGCTCTATGTGCCATCCAA
AAACACGTGAGTCGTGCTTTGCAAGCAACTGGGAAAATACTGGCACCCAAGGATCTTGTG
TCAAACTTGCGATGCATATCACGGAATTTTCGAAATGCTAGACAGGAGGATGCACATGAA
TATATGGTGAATCTGCTTGAGTCAATGCATAAATGTTGCTTACCTTCAGGAGTGCCAAGT
GAATCTCCCAGTGCTTATGACAAAAGTTTGGTCCATAAGATATTTGGTGGGCGCCTTCGC
AGTCAGGTGCAGTGCATGCAGTGTAACTTTTGCTCCGACAAGTTTGATCCGTTTCTGGAT
TTAAGTCTAGAAATTTTAAAGGCAGATTCACTACAGAGAGCACTTCAGCATTTCACTGCC
CGAGAGCTATTAGATGGTGGTCAGAGGCAGTACCAATGTCAGCAGTGCAAACAGAAAGTG
AAGGCTACCAAGCGGCTAACAATTGACAAGGCACCTCATGTCCTAACCATCCACTTGAAG
CGATTTGGTTCACATGTCCCTGGGCAAAAGATCGATAAAAAGATTCACTATGGGCCTACT
TTAGACTTGAAGCATTTTGTATCTGATACCTATGGTGGTGAATCGAAGTACACTCTCTAT
GGTGTGCTGGTTCATGCAGGTTGGAGCACCCATTCTGGTCATTATTATTGCTTTGTTCGC
ACTTCAAGTGGAAATTGGTACTCCCTTGATGACAATCAGGTTGTTCAAGTGAGTGAGAGA
AAGGTGTTGGAGCAGAAGGCATACATGTTGTTCTATGTTCGGGATAGGAAATCTCCTGTG
CCTAAGAAGTCTGTGGATGTTGCCCGCAATGACAGTGTGACTACTAATGGCATAGGAAAC
AAAATGTACTCTAATCACAGCCAGAGATTTAAGGATACTGTTCAAAATGGAATTCATGTG
AAGAATGTGGATTCCTTTTCTGGCGCAAAAGATCAAAGGGAAACATTAAGTTCTGAAGTT
TCAAAGGAAACTTCGACAAAGGGTCTGGCACCCCCAAAGGTTAATGGTGTAGTAACTAAT
GGATCCTCTTCTCTTGGAGGGGCTGTACAGCAAGAAAAGTCGAAAGTGGAAGAAGCAGGT
GAAAGAGCAAATGAGTCATCTGTTGGAGACACAAGGGGTGGACCATGCTTGCTTAAAGCT
AATCCAATTGCTCCAGTCTCCAATGGAATTCATAGACTTGAAAACAAGGGGGAGACAAGA
TGCGAAGACTCCAATCCACTACCTAATGGCAATGTCAAGGAGTTAACCTGCTCTGCTGCA
ATACCATTTAGCTCTAGCACCGTAAACAATGACAAAGATCCAAGTCTCCACAAGCAAGAA
GAGTGCAGCAAGGGAAACACCAACTCTCGAGTGGTGAAAGACATCTCCAACGGTAGTTGT
GGTGATTCAGCTGTTAATAATGATGTTGGACAGAGAAAAGCAGGTGCGAAATCTGCCGGA
GCACTGAGCCAACCAACTGTGGCTAGCTCGACCGAGAAGGAAGCTATTGACAAAGCCTGC
TTGAAAGCCAAAAAGAAGTCTTTCAAGAGTCGTGTTACCAAGATGCATCTCAGCTTTATG
ATCTTAGATCCAGCCTTAGGACTGCATAGGAAGAAGAAACACAAACGAATGAAACATAAA
ATTGGAAAGAAAAAGCGCTGTGATGCCAGTTCCTTGAATGAGAATAATGCCTCCTCTGAT
CTTGGGCCATCTACATCCGAGCTATCCCATACTTTGATCTCTTCTCCAACGCATTCTGAA
AGAAAGAGAAAGAAGTCAAAAGTTAATTCCAATGAGAAACCTTATAGTGCTGGACACAAT
GGCGATCTGCTGAGGAGTACAGTTGATGTGAGGGTTTTGAACAATGGCACTGTATTAGCA
AATGACAAGCAACCACAAAAAAGTTCCAGCTCGGCCTCAGTAGGAAACCAAGGTAGTGAC
ATTAAACAGTTCACAGATGCTAACAAGCAACCACAAAAAAGTTCCAGCTCGGCATCAGTA
GGAAACCAAGGTAGTGACATTAAACAGTTCACAGATGCTAAAGAGACCAAAGGAGTTACA
ACACAGAAAGGTCTGGTGAACATGCTTACCAGGGGTTTAGAGTCAAGTGTTGCTCGTTGG
GATGACGTAGAAGTTCCTTCCTTGAATGGTGTTGAAGCACAGAACGGAAATTGTGTCAGC
ATTGGGTACATTGGGGATGAATGGGATGAGGAATATGATAGAGGGAAGAGGAAGAAGGTT
AGGAACTCCAAAATTGAATTTGGTGGACCGAACCCTTTCCAAGAAATTGCAAGCAAAAAG
GCAAAGGTAAAGAAAGCGAGTCTTGGGCGATCTAGCTCTGCAAACCAGCCTTTCAGGATA
TTATAA

Peptide Sequence

PEP ID

XP_016502262.1
PEP Infomation

PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Nicotiana tabacum]
Sequence

MGEATATMNQMEENLGTQISGLVGSEPGTDTSSLFHRRIEFHLARKPFSGFINNGGFQLE
TLNPNSEKTGKDNGLVVGGGKKVGDAQMESNGLDPEVSFGIAFRKIMRIGAGLQNLGNTC
FLNSVLQCLTYTEPLAAYLESGKHQNSCRMAGFCALCAIQKHVSRALQATGKILAPKDLV
SNLRCISRNFRNARQEDAHEYMVNLLESMHKCCLPSGVPSESPSAYDKSLVHKIFGGRLR
SQVQCMQCNFCSDKFDPFLDLSLEILKADSLQRALQHFTARELLDGGQRQYQCQQCKQKV
KATKRLTIDKAPHVLTIHLKRFGSHVPGQKIDKKIHYGPTLDLKHFVSDTYGGESKYTLY
GVLVHAGWSTHSGHYYCFVRTSSGNWYSLDDNQVVQVSERKVLEQKAYMLFYVRDRKSPV
PKKSVDVARNDSVTTNGIGNKMYSNHSQRFKDTVQNGIHVKNVDSFSGAKDQRETLSSEV
SKETSTKGLAPPKVNGVVTNGSSSLGGAVQQEKSKVEEAGERANESSVGDTRGGPCLLKA
NPIAPVSNGIHRLENKGETRCEDSNPLPNGNVKELTCSAAIPFSSSTVNNDKDPSLHKQE
ECSKGNTNSRVVKDISNGSCGDSAVNNDVGQRKAGAKSAGALSQPTVASSTEKEAIDKAC
LKAKKKSFKSRVTKMHLSFMILDPALGLHRKKKHKRMKHKIGKKKRCDASSLNENNASSD
LGPSTSELSHTLISSPTHSERKRKKSKVNSNEKPYSAGHNGDLLRSTVDVRVLNNGTVLA
NDKQPQKSSSSASVGNQGSDIKQFTDANKQPQKSSSSASVGNQGSDIKQFTDAKETKGVT
TQKGLVNMLTRGLESSVARWDDVEVPSLNGVEAQNGNCVSIGYIGDEWDEEYDRGKRKKV
RNSKIEFGGPNPFQEIASKKAKVKKASLGRSSSANQPFRIL

Transcript Sequence

Gene sequence data has not been registered.